Package: medicaldata 0.2.0.9001

medicaldata: Data Package for Medical Datasets

Provides access to well-documented medical datasets for teaching. Featuring several from the Teaching of Statistics in the Health Sciences website <https://www.causeweb.org/tshs/category/dataset/>, a few reconstructed datasets of historical significance in medical research, some reformatted and extended from existing R packages, and some data donations.

Authors:Peter Higgins [aut, cre]

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medicaldata.pdf |medicaldata.html
medicaldata/json (API)
NEWS

# Install 'medicaldata' in R:
install.packages('medicaldata', repos = c('https://higgi13425.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/higgi13425/medicaldata/issues

Pkgdown site:https://higgi13425.github.io

Datasets:
  • abm - Observational Dataset of Acute Bacterial Meningitis
  • blood_storage - Retrospective Cohort Study of the Effects of Blood Storage on Prostate Cancer
  • cath - Observational Dataset of Cardiac Catheterization
  • cdystonia - RCT of Botulinum Toxin B for Cervical Dystonia
  • covid_testing - Deidentified Results of COVID-19 testing at the Children's Hospital of Pennsylvania (CHOP) in 2020
  • cytomegalovirus - Retrospective Cohort Study of the Effects of Donor KIR genotype on the reactivation of cytomegalovirus (CMV) after myeloablative allogeneic hematopoietic stem cell transplant.
  • diabetes - Diabetes Prediction Dataset from the Pima Indian Tribe and the NIDDK
  • esoph_ca - Esoph_ca: Esophageal Cancer dataset
  • indo_rct - RCT of Indomethacin for Prevention of Post-ERCP Pancreatitis
  • indometh - Cohort Study of the Pharmacokinetics of Intravenous Indomethacin
  • laryngoscope - Randomized, Comparison Trial of Video vs. Standard Laryngoscope
  • licorice_gargle - Randomized, Controlled Trial of Licorice Gargle before Intubation for Elective Thoracic Surgery
  • opt - Obstetrics and Periodontal Therapy Dataset
  • polyps - RCT of Sulindac for Polyp Prevention in Familial Adenomatous Polyposis
  • scurvy - Randomized Trial of Six Therapies for Scurvy
  • smartpill - Prospective Cohort Study of Intestinal Transit using a SmartPill to Compare Trauma Patients to Healthy Volunteers
  • strep_tb - RCT of Streptomycin Therapy for Tuberculosis
  • supraclavicular - Study of Supraclavicular Anesthesia
  • theoph - Cohort Study of the Pharmacokinetics of Oral Theophylline
  • thiomon - Deidentified Laboratory Data on IBD Patients using Thiourines for at least 4 weeks and their Eventual Remission/Active Status after at least 12 Weeks of Therapy.

On CRAN:

datasets

7.31 score 47 stars 317 scripts 1.4k downloads 0 exports 0 dependencies

Last updated 2 years agofrom:a73901fefd. Checks:1 OK, 7 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 29 2025
R-4.5-winNOTEJan 29 2025
R-4.5-macNOTEJan 29 2025
R-4.5-linuxNOTEJan 29 2025
R-4.4-winNOTEJan 29 2025
R-4.4-macNOTEJan 29 2025
R-4.3-winNOTEJan 29 2025
R-4.3-macNOTEJan 29 2025

Exports:

Dependencies:

Introduction

Rendered fromIntroduction.Rmdusingknitr::rmarkdownon Jan 29 2025.

Last update: 2023-01-18
Started: 2021-07-24

making_tables

Rendered frommaking_tables.Rmdusingknitr::rmarkdownon Jan 29 2025.

Last update: 2021-08-20
Started: 2021-08-19

Readme and manuals

Help Manual

Help pageTopics
Observational Dataset of Acute Bacterial Meningitisabm
Retrospective Cohort Study of the Effects of Blood Storage on Prostate Cancerblood_storage
Observational Dataset of Cardiac Catheterizationcath
RCT of Botulinum Toxin B for Cervical Dystoniacdystonia
Deidentified Results of COVID-19 testing at the Children's Hospital of Pennsylvania (CHOP) in 2020covid_testing
Retrospective Cohort Study of the Effects of Donor KIR genotype on the reactivation of cytomegalovirus (CMV) after myeloablative allogeneic hematopoietic stem cell transplant.cytomegalovirus
Diabetes Prediction Dataset from the Pima Indian Tribe and the NIDDKdiabetes
esoph_ca: Esophageal Cancer datasetesoph_ca
RCT of Indomethacin for Prevention of Post-ERCP Pancreatitisindo_rct
Cohort Study of the Pharmacokinetics of Intravenous Indomethacinindometh
Randomized, Comparison Trial of Video vs. Standard Laryngoscopelaryngoscope
Randomized, Controlled Trial of Licorice Gargle before Intubation for Elective Thoracic Surgerylicorice_gargle
Obstetrics and Periodontal Therapy Datasetopt
RCT of Sulindac for Polyp Prevention in Familial Adenomatous Polyposispolyps
Randomized Trial of Six Therapies for Scurvyscurvy
Prospective Cohort Study of Intestinal Transit using a SmartPill to Compare Trauma Patients to Healthy Volunteerssmartpill
RCT of Streptomycin Therapy for Tuberculosisstrep_tb
Study of Supraclavicular Anesthesiasupraclavicular
Cohort Study of the Pharmacokinetics of Oral Theophyllinetheoph
Deidentified Laboratory Data on IBD Patients using Thiourines for at least 4 weeks and their Eventual Remission/Active Status after at least 12 Weeks of Therapy.thiomon